Tools for analyzing data collected with a custom unity-based VR for insects.

Overview

unityvr

Tools for analyzing data collected with a custom unity-based VR for insects.

Organization:

The unityvr package contains the following submodules:

  • preproc
  • viz

In addition the scrips folder contains notebooks that illustrate how to use functions in this module based on an example file in sample (sampleLog.json).

Install:

I recommend using poetry to setup a custom conda environment. A helpful introduction can be found here.

  1. Clone repo, navigate into folder
  2. If you don't already have poetry, install poetry. You may need to close command window and open a new one.
  3. Create conda environment:
    conda create --name unityvr python=3.8
  4. Activate environment:
    conda activate unityvr
  5. Make sure you are in the top folder of the cloned repo, then install dependencies:
    poetry install
  6. Setup the new environment as an ipython kernel:
    conda install -c anaconda ipykernel
    then
    python -m ipykernel install --user --name=unityvr

Now you should be able to run the example notebooks in the scripts folder without problems.

Owner
Hannah Haberkern
Hannah Haberkern
Business Intelligence (BI) in Python, OLAP

Open Mining Business Intelligence (BI) Application Server written in Python Requirements Python 2.7 (Backend) Lua 5.2 or LuaJIT 5.1 (OML backend) Mong

Open Mining 1.2k Dec 27, 2022
Incubator for useful bioinformatics code, primarily in Python and R

Collection of useful code related to biological analysis. Much of this is discussed with examples at Blue collar bioinformatics. All code, images and

Brad Chapman 560 Jan 03, 2023
Analytical view of olist e-commerce in Brazil

Analysis of E-Commerce Public Dataset by Olist The objective of this project is to propose an analytical view of olist e-commerce in Brazil. For this

Gurpreet Singh 1 Jan 11, 2022
A data parser for the internal syncing data format used by Fog of World.

A data parser for the internal syncing data format used by Fog of World. The parser is not designed to be a well-coded library with good performance, it is more like a demo for showing the data struc

Zed(Zijun) Chen 40 Dec 12, 2022
Falcon: Interactive Visual Analysis for Big Data

Falcon: Interactive Visual Analysis for Big Data Crossfilter millions of records without latencies. This project is work in progress and not documente

Vega 803 Dec 27, 2022
Snakemake workflow for converting FASTQ files to self-contained CRAM files with maximum lossless compression.

Snakemake workflow: name A Snakemake workflow for description Usage The usage of this workflow is described in the Snakemake Workflow Catalog. If

Algorithms for reproducible bioinformatics (Koesterlab) 1 Dec 16, 2021
Airflow ETL With EKS EFS Sagemaker

Airflow ETL With EKS EFS & Sagemaker (en desarrollo) Diagrama de la solución Imp

1 Feb 14, 2022
WithPipe is a simple utility for functional piping in Python.

A utility for functional piping in Python that allows you to access any function in any scope as a partial.

Michael Milton 1 Oct 26, 2021
Python implementation of Principal Component Analysis

Principal Component Analysis Principal Component Analysis (PCA) is a dimension-reduction algorithm. The idea is to use the singular value decompositio

Ignacio Darago 1 Nov 06, 2021
Python-based Space Physics Environment Data Analysis Software

pySPEDAS pySPEDAS is an implementation of the SPEDAS framework for Python. The Space Physics Environment Data Analysis Software (SPEDAS) framework is

SPEDAS 98 Dec 22, 2022
Tools for working with MARC data in Catalogue Bridge.

catbridge_tools Tools for working with MARC data in Catalogue Bridge. Borrows heavily from PyMarc

1 Nov 11, 2021
Investigating EV charging data

Investigating EV charging data Introduction: Got an opportunity to work with a home monitoring technology company over the last 6 months whose goal wa

Yash 2 Apr 07, 2022
This creates a ohlc timeseries from downloaded CSV files from NSE India website and makes a SQLite database for your research.

NSE-timeseries-form-CSV-file-creator-and-SQL-appender- This creates a ohlc timeseries from downloaded CSV files from National Stock Exchange India (NS

PILLAI, Amal 1 Oct 02, 2022
Codes for the collection and predictive processing of bitcoin from the API of coinmarketcap

Codes for the collection and predictive processing of bitcoin from the API of coinmarketcap

Teo Calvo 5 Apr 26, 2022
Catalogue data - A Python Scripts to prepare catalogue data

catalogue_data Scripts to prepare catalogue data. Setup Clone this repo. Install

BigScience Workshop 3 Mar 03, 2022
Python package to transfer data in a fast, reliable, and packetized form.

pySerialTransfer Python package to transfer data in a fast, reliable, and packetized form.

PB2 101 Dec 07, 2022
Port of dplyr and other related R packages in python, using pipda.

Unlike other similar packages in python that just mimic the piping syntax, datar follows the API designs from the original packages as much as possible, and is tested thoroughly with the cases from t

179 Dec 21, 2022
Bearsql allows you to query pandas dataframe with sql syntax.

Bearsql adds sql syntax on pandas dataframe. It uses duckdb to speedup the pandas processing and as the sql engine

14 Jun 22, 2022
Repository created with LinkedIn profile analysis project done

EN/en Repository created with LinkedIn profile analysis project done. The datase

Mayara Canaver 4 Aug 06, 2022
This program analyzes a DNA sequence and outputs snippets of DNA that are likely to be protein-coding genes.

This program analyzes a DNA sequence and outputs snippets of DNA that are likely to be protein-coding genes.

1 Dec 28, 2021