Make sankey, alluvial and sankey bump plots in ggplot

Overview

ggsankey

The goal of ggsankey is to make beautiful sankey, alluvial and sankey bump plots in ggplot2

Installation

You can install the development version of ggsankey from github with:

# install.packages("devtools")
devtools::install_github("davidsjoberg/ggsankey")

How does it work

Google defines a sankey as:

A sankey diagram is a visualization used to depict a flow from one set of values to another. The things being connected are called nodes and the connections are called links. Sankeys are best used when you want to show a many-to-many mapping between two domains or multiple paths through a set of stages.

To plot a sankey diagram with ggsankey each observation has a stage (called a discrete x-value in ggplot) and be part of a node. Furthermore, each observation needs to have instructions of which node it will belong to in the next stage. See the image below for some clarification.

Hence, to use geom_sankey the aestethics x, next_x, node and next_node are required. The last stage should point to NA. The aestethics fill and color will affect both nodes and flows.

To controll geometries (not changed by data) like fill, color, size, alpha etc for nodes and flows you can either choose to set a global value that affect both, or you can specify which one you want to alter. For example node.color = 'black' will only draw a black line around the nodes, but not the flows (links).

Example

geom_sankey

A basic sankey plot that shows how dimensions are linked.

library(ggsankey)
library(dplyr)
library(ggplot2)

df <- mtcars %>%
  make_long(cyl, vs, am, gear, carb)

ggplot(df, aes(x = x, 
               next_x = next_x, 
               node = node, 
               next_node = next_node,
               fill = factor(node))) +
  geom_sankey()

And by adding a little pimp.

  • Labels with geom_sankey_label which places labels in the center of nodes if given the same aestethics.

  • ggsankey also comes with custom minimalistic themes that can be used. Here I use theme_sankey.

ggplot(df, aes(x = x, next_x = next_x, node = node, next_node = next_node, fill = factor(node), label = node)) +
  geom_sankey(flow.alpha = .6,
              node.color = "gray30") +
  geom_sankey_label(size = 3, color = "white", fill = "gray40") +
  scale_fill_viridis_d() +
  theme_sankey(base_size = 18) +
  labs(x = NULL) +
  theme(legend.position = "none",
        plot.title = element_text(hjust = .5)) +
  ggtitle("Car features")

geom_alluvial

Alluvial plots are very similiar to sankey plots but have no spaces between nodes and start at y = 0 instead being centered around the x-axis.

ggplot(df, aes(x = x, next_x = next_x, node = node, next_node = next_node, fill = factor(node), label = node)) +
  geom_alluvial(flow.alpha = .6) +
  geom_alluvial_text(size = 3, color = "white") +
  scale_fill_viridis_d() +
  theme_alluvial(base_size = 18) +
  labs(x = NULL) +
  theme(legend.position = "none",
        plot.title = element_text(hjust = .5)) +
  ggtitle("Car features")

geom_sankey_bump

Sankey bump plots is mix between bump plots and sankey and mostly useful for time series. When a group becomes larger than another it bumps above it.

# install.packages("gapminder")
library(gapminder)

df <- gapminder %>%
  group_by(continent, year) %>%
  summarise(gdp = (sum_(pop * gdpPercap)/1e9) %>% round(0), .groups = "keep") %>%
  ungroup()

ggplot(df, aes(x = year,
               node = continent,
               fill = continent,
               value = gdp)) +
  geom_sankey_bump(space = 0, type = "alluvial", color = "transparent", smooth = 6) +
  scale_fill_viridis_d(option = "A", alpha = .8) +
  theme_sankey_bump(base_size = 16) +
  labs(x = NULL,
       y = "GDP ($ bn)",
       fill = NULL,
       color = NULL) +
  theme(legend.position = "bottom") +
  labs(title = "GDP development per continent")

Owner
David Sjoberg
Happy R user. Twitter: @davsjob
David Sjoberg
The Metabolomics Integrator (MINT) is a post-processing tool for liquid chromatography-mass spectrometry (LCMS) based metabolomics.

MINT (Metabolomics Integrator) The Metabolomics Integrator (MINT) is a post-processing tool for liquid chromatography-mass spectrometry (LCMS) based m

Sören Wacker 0 May 04, 2022
This tool is designed to help administrators get an overview of their Active Directory structure.

This tool is designed to help administrators get an overview of their Active Directory structure. In the group view you can see all elements of an AD (OU, USER, GROUPS, COMPUTERS etc.). In the user v

deexno 2 Oct 30, 2022
Functions for easily making publication-quality figures with matplotlib.

Data-viz utils 📈 Functions for data visualization in matplotlib 📚 API Can be installed using pip install dvu and then imported with import dvu. You

Chandan Singh 16 Sep 15, 2022
Simulation du problème de Monty Hall avec Python et matplotlib

Le problème de Monty Hall C'est un jeu télévisé où il y a trois portes sur le plateau de jeu. Seule une de ces portes cache un trésor. Il n'y a rien d

ETCHART YANG 1 Jan 06, 2022
VDLdraw - Batch plot the log files exported from VisualDL using Matplotlib

VDLdraw Batch plot the log files exported from VisualDL using Matplotlib. At pre

Yizhou Chen 5 Sep 26, 2022
FURY - A software library for scientific visualization in Python

Free Unified Rendering in Python A software library for scientific visualization in Python. General Information • Key Features • Installation • How to

169 Dec 21, 2022
A custom qq-plot for two sample data comparision

QQ-Plot 2 Sample Just a gist to include the custom code to draw a qq-plot in python when dealing with a "two sample problem". This means when u try to

1 Dec 20, 2021
a simple REPL display lib for circuitpython

Circuitpython-termio-lib a simple REPL display lib for circuitpython Fonctions cls clear terminal screen and set cursor on top left : coords 0,0 usage

BeBoXoS 1 Nov 17, 2021
Create artistic visualisations with your exercise data (Python version)

strava_py Create artistic visualisations with your exercise data (Python version). This is a port of the R strava package to Python. Examples Facets A

Marcus Volz 53 Dec 28, 2022
Gesture controlled media player

Media Player Gesture Control Gesture controller for media player with MediaPipe, VLC and OpenCV. Contents About Setup About A tool for using gestures

Atharva Joshi 2 Dec 22, 2021
Automatically generate GitHub activity!

Commit Bot Automatically generate GitHub activity! We've all wanted to be the developer that commits every day, but that requires a lot of work. Let's

Ricky 4 Jun 07, 2022
Simple Inkscape Scripting

Simple Inkscape Scripting Description In the Inkscape vector-drawing program, how would you go about drawing 100 diamonds, each with a random color an

Scott Pakin 140 Dec 27, 2022
Python histogram library - histograms as updateable, fully semantic objects with visualization tools. [P]ython [HYST]ograms.

physt P(i/y)thon h(i/y)stograms. Inspired (and based on) numpy.histogram, but designed for humans(TM) on steroids(TM). The goal is to unify different

Jan Pipek 120 Dec 08, 2022
Matplotlib JOTA style for making figures

Matplotlib JOTA style for making figures This repo has Matplotlib JOTA style to format plots and figures for publications and presentation.

JOTA JORNALISMO 2 May 05, 2022
Data visualization electromagnetic spectrum

Datenvisualisierung-Elektromagnetischen-Spektrum Anhand des Moduls matplotlib sollen die Daten des elektromagnetischen Spektrums dargestellt werden. D

Pulsar 1 Sep 01, 2022
Backend app for visualizing CANedge log files in Grafana (directly from local disk or S3)

CANedge Grafana Backend - Visualize CAN/LIN Data in Dashboards This project enables easy dashboard visualization of log files from the CANedge CAN/LIN

13 Dec 15, 2022
EPViz is a tool to aid researchers in developing, validating, and reporting their predictive modeling outputs.

EPViz (EEG Prediction Visualizer) EPViz is a tool to aid researchers in developing, validating, and reporting their predictive modeling outputs. A lig

Jeff 2 Oct 19, 2022
kyle's vision of how datadog's python client should look

kyle's datadog python vision/proposal not for production use See examples/comprehensive.py for a mostly working example of the proposed API. 📈 🐶 ❤️

Kyle Verhoog 2 Nov 21, 2021
Interactive Data Visualization in the browser, from Python

Bokeh is an interactive visualization library for modern web browsers. It provides elegant, concise construction of versatile graphics, and affords hi

Bokeh 17.1k Dec 31, 2022
Python toolkit for defining+simulating+visualizing+analyzing attractors, dynamical systems, iterated function systems, roulette curves, and more

Attractors A small module that provides functions and classes for very efficient simulation and rendering of iterated function systems; dynamical syst

1 Aug 04, 2021